Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 MTND6P24-201ENST00000440466 518 ntBASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 AC007389.4-201ENST00000454674 793 ntBASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 AC004790.1-201ENST00000612686 536 ntBASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 SLC22A20-204ENST00000530038 1673 ntBASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.28■□□□□ 0.84
ZC3H4Q9UPT8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 RN7SL618P-201ENST00000477850 296 ntBASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H4Q9UPT8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 FOXO1B-201ENST00000504678 1527 ntBASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 KRT18P34-201ENST00000488218 1270 ntBASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 AL079307.3-201ENST00000556114 283 ntBASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 MIR4538-201ENST00000581377 78 ntBASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 AC090164.3-201ENST00000610780 2143 ntBASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 MIR6775-201ENST00000617557 69 ntBASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZC3H4Q9UPT8 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 TOP3BP1-201ENST00000420768 1380 ntBASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 AC114501.2-201ENST00000439631 535 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms