Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 AL671277.1-201ENST00000429656 993 ntBASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 AL513210.1-201ENST00000629608 234 ntBASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 AC105339.1-204ENST00000636249 355 ntBASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE7Q9UBL6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 AL355306.1-201ENST00000415580 579 ntBASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 ADH5P3-201ENST00000433842 1137 ntBASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 FAM86C2P-203ENST00000528684 1004 ntBASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 AL009183.1-201ENST00000603760 355 ntBASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CPNE7Q9UBL6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 PMS2P2-201ENST00000425039 1128 ntBASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 AC004835.2-201ENST00000603762 682 ntBASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 AL161645.1-201ENST00000622716 1255 ntBASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 TUBB8P12-201ENST00000308911 1335 ntBASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 TUBB7P-202ENST00000428444 1305 ntBASIC16.35■□□□□ 0.21
CPNE7Q9UBL6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms