Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 AC004461.1-201ENST00000412461 403 ntBASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.01□□□□□ -0.01
CLCF1Q9UBD9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 AC131009.4-201ENST00000624048 1740 ntBASIC15□□□□□ -0.01
CLCF1Q9UBD9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 KRT18P28-201ENST00000453838 1332 ntBASIC15□□□□□ -0.01
CLCF1Q9UBD9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 RNU1-129P-201ENST00000384064 167 ntBASIC15□□□□□ -0.01
CLCF1Q9UBD9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 METTL21AP1-201ENST00000438852 635 ntBASIC15□□□□□ -0.01
CLCF1Q9UBD9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 FAM86C2P-203ENST00000528684 1004 ntBASIC15□□□□□ -0.01
CLCF1Q9UBD9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 MIR3909-201ENST00000579518 119 ntBASIC15□□□□□ -0.01
CLCF1Q9UBD9 U1.21-201ENST00000580816 167 ntBASIC15□□□□□ -0.01
CLCF1Q9UBD9 AC004835.2-201ENST00000603762 682 ntBASIC15□□□□□ -0.01
CLCF1Q9UBD9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 AP001350.2-201ENST00000625104 1094 ntBASIC15□□□□□ -0.01
CLCF1Q9UBD9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLCF1Q9UBD9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLCF1Q9UBD9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.99□□□□□ -0.01
CLCF1Q9UBD9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms