Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 AL805961.1-202ENST00000641562 540 ntBASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 TOP3BP1-201ENST00000420768 1380 ntBASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 PTCHD3P3-201ENST00000403073 906 ntBASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 ELK2BP-201ENST00000415014 1224 ntBASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 AC073648.2-201ENST00000510116 352 ntBASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 HLA-A-202ENST00000376806 1854 ntBASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC40Q9H9A6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 UNC93B7-201ENST00000509439 705 ntBASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 AC006504.4-201ENST00000592118 1568 ntBASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 PI4KAP1-204ENST00000612579 1703 ntBASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms