Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AP002414.4-201ENST00000589764 1148 ntBASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 AC073592.4-201ENST00000623827 446 ntBASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 PCDHB17P-201ENST00000539533 2393 ntBASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 AL021920.2-201ENST00000624828 1351 ntBASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 RCN1P2-201ENST00000398357 915 ntBASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 PCED1CP-201ENST00000419887 785 ntBASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 AP002383.4-201ENST00000442518 975 ntBASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 NUS1P1-201ENST00000446295 882 ntBASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J3Q9H1A7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 PCDHA1-201ENST00000378133 2726 ntBASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 IER3-202ENST00000376377 1350 ntBASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 AL590326.2-201ENST00000625139 305 ntBASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J3Q9H1A7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms