Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 AL391256.1-201ENST00000443260 1855 ntBASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXP3Q9BZS1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 AL162727.3-201ENST00000635661 2787 ntBASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 HLA-J-202ENST00000469281 1241 ntBASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 AC005336.2-201ENST00000593183 939 ntBASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.49■□□□□ 0.39
FOXP3Q9BZS1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 AL645728.1-201ENST00000366221 2101 ntBASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 POM121L3P-201ENST00000419331 1163 ntBASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 MIR5100-201ENST00000579544 119 ntBASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXP3Q9BZS1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 FAM197Y8-203ENST00000450145 560 ntBASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 AC009533.2-201ENST00000543664 586 ntBASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
FOXP3Q9BZS1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms