Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 CYP2T1P-202ENST00000641596 2535 ntBASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 AC009336.1-201ENST00000608941 1553 ntBASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 AL162727.3-201ENST00000635661 2787 ntBASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THUMPD3Q9BV44 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 AC092364.2-201ENST00000596710 2692 ntBASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 TSSC2-201ENST00000450217 709 ntBASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 AP002490.2-201ENST00000524791 560 ntBASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 AC005336.2-201ENST00000593183 939 ntBASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 AL353593.2-201ENST00000602529 1483 ntBASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THUMPD3Q9BV44 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD3Q9BV44 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD3Q9BV44 KRT18P1-202ENST00000452408 1331 ntBASIC16.21■□□□□ 0.19
THUMPD3Q9BV44 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.21■□□□□ 0.19
THUMPD3Q9BV44 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.21■□□□□ 0.19
THUMPD3Q9BV44 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD3Q9BV44 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD3Q9BV44 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THUMPD3Q9BV44 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
THUMPD3Q9BV44 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms