Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 STARP1-201ENST00000397973 869 ntBASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 PCED1CP-201ENST00000419887 785 ntBASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 KRT18P23-201ENST00000435622 1283 ntBASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 IER3-202ENST00000376377 1350 ntBASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.16□□□□□ -0.3
NDUFAF3Q9BU61 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 AC112907.2-201ENST00000448639 330 ntBASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 VENTXP5-201ENST00000523979 775 ntBASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 AC104390.1-201ENST00000555663 520 ntBASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 GCSHP2-201ENST00000560971 527 ntBASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NDUFAF3Q9BU61 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.15□□□□□ -0.31
NDUFAF3Q9BU61 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
NDUFAF3Q9BU61 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.15□□□□□ -0.31
NDUFAF3Q9BU61 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NDUFAF3Q9BU61 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
NDUFAF3Q9BU61 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.14□□□□□ -0.31
NDUFAF3Q9BU61 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.14□□□□□ -0.31
NDUFAF3Q9BU61 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFAF3Q9BU61 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFAF3Q9BU61 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NDUFAF3Q9BU61 AC026748.1-201ENST00000624349 3251 ntBASIC13.14□□□□□ -0.31
NDUFAF3Q9BU61 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFAF3Q9BU61 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFAF3Q9BU61 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFAF3Q9BU61 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.14□□□□□ -0.31
NDUFAF3Q9BU61 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms