Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AP000997.3-201ENST00000623333 2250 ntBASIC17.41■□□□□ 0.38
CDX2Q99626 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDX2Q99626 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDX2Q99626 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDX2Q99626 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CDX2Q99626 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX2Q99626 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX2Q99626 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.4■□□□□ 0.38
CDX2Q99626 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX2Q99626 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDX2Q99626 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDX2Q99626 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.4■□□□□ 0.38
CDX2Q99626 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDX2Q99626 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.4■□□□□ 0.38
CDX2Q99626 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDX2Q99626 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.4■□□□□ 0.38
CDX2Q99626 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.4■□□□□ 0.38
CDX2Q99626 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDX2Q99626 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.4■□□□□ 0.38
CDX2Q99626 AL162726.2-201ENST00000438986 1017 ntBASIC17.4■□□□□ 0.38
CDX2Q99626 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.4■□□□□ 0.38
CDX2Q99626 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.4■□□□□ 0.38
CDX2Q99626 TIMM17BP1-201ENST00000545713 516 ntBASIC17.4■□□□□ 0.38
CDX2Q99626 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.4■□□□□ 0.38
CDX2Q99626 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.4■□□□□ 0.38
CDX2Q99626 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.4■□□□□ 0.38
CDX2Q99626 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDX2Q99626 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX2Q99626 CU634019.7-201ENST00000624153 1185 ntBASIC17.4■□□□□ 0.38
CDX2Q99626 FP236241.2-201ENST00000624906 1185 ntBASIC17.4■□□□□ 0.38
CDX2Q99626 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX2Q99626 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX2Q99626 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDX2Q99626 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.4■□□□□ 0.38
CDX2Q99626 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDX2Q99626 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDX2Q99626 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.4■□□□□ 0.38
CDX2Q99626 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.4■□□□□ 0.38
CDX2Q99626 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.39■□□□□ 0.38
CDX2Q99626 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX2Q99626 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX2Q99626 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDX2Q99626 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDX2Q99626 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX2Q99626 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.39■□□□□ 0.37
CDX2Q99626 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX2Q99626 AL031598.1-201ENST00000561511 1773 ntBASIC17.39■□□□□ 0.37
CDX2Q99626 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX2Q99626 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDX2Q99626 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.39■□□□□ 0.37
CDX2Q99626 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDX2Q99626 SPDYE17-201ENST00000412399 783 ntBASIC17.39■□□□□ 0.37
CDX2Q99626 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDX2Q99626 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.39■□□□□ 0.37
CDX2Q99626 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.39■□□□□ 0.37
CDX2Q99626 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.39■□□□□ 0.37
CDX2Q99626 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.39■□□□□ 0.37
CDX2Q99626 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CDX2Q99626 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.39■□□□□ 0.37
CDX2Q99626 AC128714.1-201ENST00000637035 887 ntBASIC17.39■□□□□ 0.37
CDX2Q99626 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX2Q99626 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX2Q99626 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDX2Q99626 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX2Q99626 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDX2Q99626 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CDX2Q99626 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX2Q99626 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CDX2Q99626 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.38■□□□□ 0.37
CDX2Q99626 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX2Q99626 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDX2Q99626 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX2Q99626 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX2Q99626 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX2Q99626 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX2Q99626 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX2Q99626 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDX2Q99626 RPS2P36-201ENST00000456516 831 ntBASIC17.38■□□□□ 0.37
CDX2Q99626 UPF3AP2-201ENST00000457924 1132 ntBASIC17.38■□□□□ 0.37
CDX2Q99626 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.38■□□□□ 0.37
CDX2Q99626 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.38■□□□□ 0.37
CDX2Q99626 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX2Q99626 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX2Q99626 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CDX2Q99626 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.38■□□□□ 0.37
CDX2Q99626 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.38■□□□□ 0.37
CDX2Q99626 SPCS2P2-201ENST00000603270 608 ntBASIC17.38■□□□□ 0.37
CDX2Q99626 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.38■□□□□ 0.37
CDX2Q99626 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX2Q99626 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDX2Q99626 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.38■□□□□ 0.37
CDX2Q99626 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX2Q99626 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX2Q99626 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX2Q99626 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX2Q99626 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX2Q99626 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.38■□□□□ 0.37
CDX2Q99626 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms