Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
NEK1Q96PY6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.02■□□□□ 0.79
NEK1Q96PY6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
NEK1Q96PY6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.02■□□□□ 0.79
NEK1Q96PY6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEK1Q96PY6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEK1Q96PY6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEK1Q96PY6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NEK1Q96PY6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEK1Q96PY6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEK1Q96PY6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEK1Q96PY6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 AC107918.2-201ENST00000530817 355 ntBASIC20.01■□□□□ 0.79
NEK1Q96PY6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 MPDU1-223ENST00000582151 728 ntBASIC20.01■□□□□ 0.79
NEK1Q96PY6 SLC25A6P4-201ENST00000586535 553 ntBASIC20.01■□□□□ 0.79
NEK1Q96PY6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEK1Q96PY6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEK1Q96PY6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEK1Q96PY6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEK1Q96PY6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.01■□□□□ 0.79
NEK1Q96PY6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEK1Q96PY6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20■□□□□ 0.79
NEK1Q96PY6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20■□□□□ 0.79
NEK1Q96PY6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
NEK1Q96PY6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20■□□□□ 0.79
NEK1Q96PY6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
NEK1Q96PY6 AC009078.2-202ENST00000463353 338 ntBASIC20■□□□□ 0.79
NEK1Q96PY6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20■□□□□ 0.79
NEK1Q96PY6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20■□□□□ 0.79
NEK1Q96PY6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20■□□□□ 0.79
NEK1Q96PY6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NEK1Q96PY6 MIR4492-201ENST00000581627 80 ntBASIC20■□□□□ 0.79
NEK1Q96PY6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
NEK1Q96PY6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NEK1Q96PY6 AC116407.3-201ENST00000623905 1129 ntBASIC20■□□□□ 0.79
NEK1Q96PY6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
NEK1Q96PY6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20■□□□□ 0.79
NEK1Q96PY6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NEK1Q96PY6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NEK1Q96PY6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEK1Q96PY6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
NEK1Q96PY6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.99■□□□□ 0.79
NEK1Q96PY6 AC129492.6-201ENST00000611383 1305 ntBASIC19.99■□□□□ 0.79
NEK1Q96PY6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEK1Q96PY6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.98■□□□□ 0.79
NEK1Q96PY6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NEK1Q96PY6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NEK1Q96PY6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms