Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 TOB2P1-201ENST00000469761 992 ntBASIC17.93■□□□□ 0.46
CALR3Q96L12 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.93■□□□□ 0.46
CALR3Q96L12 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.93■□□□□ 0.46
CALR3Q96L12 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.93■□□□□ 0.46
CALR3Q96L12 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CALR3Q96L12 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CALR3Q96L12 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CALR3Q96L12 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CALR3Q96L12 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.93■□□□□ 0.46
CALR3Q96L12 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.93■□□□□ 0.46
CALR3Q96L12 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CALR3Q96L12 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CALR3Q96L12 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.93■□□□□ 0.46
CALR3Q96L12 AC007950.2-201ENST00000615045 2347 ntBASIC17.93■□□□□ 0.46
CALR3Q96L12 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CALR3Q96L12 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CALR3Q96L12 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.93■□□□□ 0.46
CALR3Q96L12 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CALR3Q96L12 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.93■□□□□ 0.46
CALR3Q96L12 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
CALR3Q96L12 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.93■□□□□ 0.46
CALR3Q96L12 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.92■□□□□ 0.46
CALR3Q96L12 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CALR3Q96L12 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
CALR3Q96L12 ME2P1-201ENST00000426028 1970 ntBASIC17.92■□□□□ 0.46
CALR3Q96L12 AC006277.1-201ENST00000624348 1610 ntBASIC17.92■□□□□ 0.46
CALR3Q96L12 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CALR3Q96L12 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CALR3Q96L12 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.92■□□□□ 0.46
CALR3Q96L12 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.92■□□□□ 0.46
CALR3Q96L12 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.92■□□□□ 0.46
CALR3Q96L12 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.92■□□□□ 0.46
CALR3Q96L12 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.92■□□□□ 0.46
CALR3Q96L12 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CALR3Q96L12 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CALR3Q96L12 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.92■□□□□ 0.46
CALR3Q96L12 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.92■□□□□ 0.46
CALR3Q96L12 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.92■□□□□ 0.46
CALR3Q96L12 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.92■□□□□ 0.46
CALR3Q96L12 AC004817.3-201ENST00000602957 2129 ntBASIC17.92■□□□□ 0.46
CALR3Q96L12 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CALR3Q96L12 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CALR3Q96L12 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CALR3Q96L12 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.91■□□□□ 0.46
CALR3Q96L12 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
CALR3Q96L12 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.91■□□□□ 0.46
CALR3Q96L12 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 AP002383.4-201ENST00000442518 975 ntBASIC17.91■□□□□ 0.46
CALR3Q96L12 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.91■□□□□ 0.46
CALR3Q96L12 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.91■□□□□ 0.46
CALR3Q96L12 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.91■□□□□ 0.46
CALR3Q96L12 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.91■□□□□ 0.46
CALR3Q96L12 AP002414.4-201ENST00000589764 1148 ntBASIC17.91■□□□□ 0.46
CALR3Q96L12 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.91■□□□□ 0.46
CALR3Q96L12 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.91■□□□□ 0.46
CALR3Q96L12 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.91■□□□□ 0.46
CALR3Q96L12 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 LINC00554-201ENST00000564841 3011 ntBASIC17.91■□□□□ 0.46
CALR3Q96L12 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.91■□□□□ 0.46
CALR3Q96L12 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CALR3Q96L12 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CALR3Q96L12 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.91■□□□□ 0.46
CALR3Q96L12 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.91■□□□□ 0.46
CALR3Q96L12 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CALR3Q96L12 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CALR3Q96L12 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms