Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 CRYGEP-201ENST00000412192 528 ntBASIC14.88□□□□□ -0.03
TMEM54Q969K7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 CXCL1P1-201ENST00000502804 216 ntBASIC14.88□□□□□ -0.03
TMEM54Q969K7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 CYP2A7P1-201ENST00000595391 815 ntBASIC14.88□□□□□ -0.03
TMEM54Q969K7 Z83851.2-201ENST00000609564 659 ntBASIC14.88□□□□□ -0.03
TMEM54Q969K7 ACTL9-202ENST00000612068 1252 ntBASIC14.88□□□□□ -0.03
TMEM54Q969K7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.88□□□□□ -0.03
TMEM54Q969K7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
TMEM54Q969K7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 AC079776.4-201ENST00000511039 504 ntBASIC14.87□□□□□ -0.03
TMEM54Q969K7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 AC087641.1-201ENST00000557561 1021 ntBASIC14.87□□□□□ -0.03
TMEM54Q969K7 AC145285.3-201ENST00000564603 959 ntBASIC14.87□□□□□ -0.03
TMEM54Q969K7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.87□□□□□ -0.03
TMEM54Q969K7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 AP001350.2-201ENST00000625104 1094 ntBASIC14.87□□□□□ -0.03
TMEM54Q969K7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM54Q969K7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM54Q969K7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM54Q969K7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM54Q969K7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM54Q969K7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM54Q969K7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM54Q969K7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM54Q969K7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM54Q969K7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM54Q969K7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEM54Q969K7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEM54Q969K7 KRT8P39-201ENST00000396270 1433 ntBASIC14.86□□□□□ -0.03
TMEM54Q969K7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM54Q969K7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TMEM54Q969K7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms