Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.24■□□□□ 0.67
ERCC4Q92889 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.24■□□□□ 0.67
ERCC4Q92889 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ERCC4Q92889 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
ERCC4Q92889 AC004817.3-201ENST00000602957 2129 ntBASIC19.24■□□□□ 0.67
ERCC4Q92889 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERCC4Q92889 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 HYMAI-201ENST00000635591 3347 ntBASIC19.23■□□□□ 0.67
ERCC4Q92889 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC4Q92889 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ERCC4Q92889 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.23■□□□□ 0.67
ERCC4Q92889 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC4Q92889 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ERCC4Q92889 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
ERCC4Q92889 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC4Q92889 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.23■□□□□ 0.67
ERCC4Q92889 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.23■□□□□ 0.67
ERCC4Q92889 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 PCED1CP-201ENST00000419887 785 ntBASIC19.23■□□□□ 0.67
ERCC4Q92889 LINC00265-3P-201ENST00000447588 903 ntBASIC19.23■□□□□ 0.67
ERCC4Q92889 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.23■□□□□ 0.67
ERCC4Q92889 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.23■□□□□ 0.67
ERCC4Q92889 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.23■□□□□ 0.67
ERCC4Q92889 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.23■□□□□ 0.67
ERCC4Q92889 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.23■□□□□ 0.67
ERCC4Q92889 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.23■□□□□ 0.67
ERCC4Q92889 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.23■□□□□ 0.67
ERCC4Q92889 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.23■□□□□ 0.67
ERCC4Q92889 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.23■□□□□ 0.67
ERCC4Q92889 AC026691.1-201ENST00000602502 2017 ntBASIC19.23■□□□□ 0.67
ERCC4Q92889 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.23■□□□□ 0.67
ERCC4Q92889 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERCC4Q92889 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC4Q92889 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC4Q92889 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.22■□□□□ 0.67
ERCC4Q92889 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
ERCC4Q92889 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ERCC4Q92889 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.22■□□□□ 0.67
ERCC4Q92889 IGHV3-47-201ENST00000425060 335 ntBASIC19.22■□□□□ 0.67
ERCC4Q92889 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ERCC4Q92889 KRT17P6-201ENST00000453795 1220 ntBASIC19.22■□□□□ 0.67
ERCC4Q92889 MINOS1P3-201ENST00000457048 203 ntBASIC19.22■□□□□ 0.67
ERCC4Q92889 VENTXP7-201ENST00000475503 772 ntBASIC19.22■□□□□ 0.67
ERCC4Q92889 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.22■□□□□ 0.67
ERCC4Q92889 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.22■□□□□ 0.67
ERCC4Q92889 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.22■□□□□ 0.67
ERCC4Q92889 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ERCC4Q92889 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.22■□□□□ 0.67
ERCC4Q92889 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ERCC4Q92889 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ERCC4Q92889 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.22■□□□□ 0.67
ERCC4Q92889 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERCC4Q92889 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
ERCC4Q92889 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms