Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.96□□□□□ -0.01
AP3S1Q92572 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
AP3S1Q92572 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.96□□□□□ -0.01
AP3S1Q92572 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.96□□□□□ -0.01
AP3S1Q92572 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 TSPY12P-201ENST00000421279 868 ntBASIC14.96□□□□□ -0.01
AP3S1Q92572 AC096633.1-201ENST00000422446 749 ntBASIC14.96□□□□□ -0.01
AP3S1Q92572 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.96□□□□□ -0.01
AP3S1Q92572 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
AP3S1Q92572 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 RNA5SP413-201ENST00000516373 109 ntBASIC14.96□□□□□ -0.01
AP3S1Q92572 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.96□□□□□ -0.01
AP3S1Q92572 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.96□□□□□ -0.01
AP3S1Q92572 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.96□□□□□ -0.01
AP3S1Q92572 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.96□□□□□ -0.01
AP3S1Q92572 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.96□□□□□ -0.01
AP3S1Q92572 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.96□□□□□ -0.01
AP3S1Q92572 AC024563.2-201ENST00000603282 481 ntBASIC14.96□□□□□ -0.01
AP3S1Q92572 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
AP3S1Q92572 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.96□□□□□ -0.01
AP3S1Q92572 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
AP3S1Q92572 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.96□□□□□ -0.02
AP3S1Q92572 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP3S1Q92572 SBF1P1-201ENST00000444527 5631 ntBASIC14.96□□□□□ -0.02
AP3S1Q92572 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP3S1Q92572 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP3S1Q92572 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.96□□□□□ -0.02
AP3S1Q92572 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
AP3S1Q92572 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.95□□□□□ -0.02
AP3S1Q92572 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
AP3S1Q92572 AL603832.2-201ENST00000566195 2125 ntBASIC14.95□□□□□ -0.02
AP3S1Q92572 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
AP3S1Q92572 AL135905.2-201ENST00000584934 1404 ntBASIC14.95□□□□□ -0.02
AP3S1Q92572 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
AP3S1Q92572 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.95□□□□□ -0.02
AP3S1Q92572 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
AP3S1Q92572 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.95□□□□□ -0.02
AP3S1Q92572 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.95□□□□□ -0.02
AP3S1Q92572 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.95□□□□□ -0.02
AP3S1Q92572 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.95□□□□□ -0.02
AP3S1Q92572 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
AP3S1Q92572 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
AP3S1Q92572 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.95□□□□□ -0.02
AP3S1Q92572 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S1Q92572 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.95□□□□□ -0.02
AP3S1Q92572 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
AP3S1Q92572 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
AP3S1Q92572 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
AP3S1Q92572 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
AP3S1Q92572 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
AP3S1Q92572 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.94□□□□□ -0.02
AP3S1Q92572 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.94□□□□□ -0.02
AP3S1Q92572 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.94□□□□□ -0.02
AP3S1Q92572 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 AC097376.2-205ENST00000610159 5334 ntBASIC14.94□□□□□ -0.02
AP3S1Q92572 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
AP3S1Q92572 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms