Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TM9SF4Q92544 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TM9SF4Q92544 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TM9SF4Q92544 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
TM9SF4Q92544 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TM9SF4Q92544 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
TM9SF4Q92544 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TM9SF4Q92544 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
TM9SF4Q92544 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TM9SF4Q92544 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 LINC00304-203ENST00000565008 1864 ntBASIC16.01■□□□□ 0.15
TM9SF4Q92544 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 KRT18P28-201ENST00000453838 1332 ntBASIC16.01■□□□□ 0.15
TM9SF4Q92544 AC106886.4-201ENST00000623557 2502 ntBASIC16.01■□□□□ 0.15
TM9SF4Q92544 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 HCG4B-203ENST00000450128 991 ntBASIC16.01■□□□□ 0.15
TM9SF4Q92544 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 AC002558.1-201ENST00000488906 803 ntBASIC16.01■□□□□ 0.15
TM9SF4Q92544 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 AC004790.2-201ENST00000623588 572 ntBASIC16.01■□□□□ 0.15
TM9SF4Q92544 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 AC046158.3-201ENST00000624947 2558 ntBASIC16.01■□□□□ 0.15
TM9SF4Q92544 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.01■□□□□ 0.15
TM9SF4Q92544 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TM9SF4Q92544 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16■□□□□ 0.15
TM9SF4Q92544 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16■□□□□ 0.15
TM9SF4Q92544 AGGF1P2-201ENST00000426656 2106 ntBASIC16■□□□□ 0.15
TM9SF4Q92544 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TM9SF4Q92544 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TM9SF4Q92544 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
TM9SF4Q92544 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TM9SF4Q92544 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16■□□□□ 0.15
TM9SF4Q92544 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 AP002414.1-201ENST00000391405 1147 ntBASIC16■□□□□ 0.15
TM9SF4Q92544 LBH-203ENST00000404397 543 ntTSL 4 BASIC16■□□□□ 0.15
TM9SF4Q92544 HTR5BP-201ENST00000430851 1154 ntBASIC16■□□□□ 0.15
TM9SF4Q92544 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16■□□□□ 0.15
TM9SF4Q92544 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16■□□□□ 0.15
TM9SF4Q92544 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16■□□□□ 0.15
TM9SF4Q92544 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16■□□□□ 0.15
TM9SF4Q92544 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16■□□□□ 0.15
TM9SF4Q92544 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16■□□□□ 0.15
TM9SF4Q92544 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16■□□□□ 0.15
TM9SF4Q92544 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16■□□□□ 0.15
TM9SF4Q92544 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16■□□□□ 0.15
TM9SF4Q92544 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TM9SF4Q92544 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16■□□□□ 0.15
TM9SF4Q92544 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TM9SF4Q92544 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16■□□□□ 0.15
TM9SF4Q92544 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TM9SF4Q92544 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.99■□□□□ 0.15
TM9SF4Q92544 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TM9SF4Q92544 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TM9SF4Q92544 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.99■□□□□ 0.15
TM9SF4Q92544 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.99■□□□□ 0.15
TM9SF4Q92544 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.99■□□□□ 0.15
TM9SF4Q92544 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TM9SF4Q92544 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TM9SF4Q92544 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TM9SF4Q92544 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TM9SF4Q92544 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TM9SF4Q92544 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TM9SF4Q92544 AC097637.2-201ENST00000624096 1997 ntBASIC15.99■□□□□ 0.15
TM9SF4Q92544 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TM9SF4Q92544 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TM9SF4Q92544 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms