Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMC1Q8TDI8 EGFEM1P-202ENST00000431685 1563 ntBASIC23.51■■□□□ 1.35
TMC1Q8TDI8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
TMC1Q8TDI8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMC1Q8TDI8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMC1Q8TDI8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
TMC1Q8TDI8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TMC1Q8TDI8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TMC1Q8TDI8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 ACTG1P14-201ENST00000446382 1122 ntBASIC23.49■■□□□ 1.35
TMC1Q8TDI8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 RHBDF1P1-201ENST00000427504 1941 ntBASIC23.49■■□□□ 1.35
TMC1Q8TDI8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC23.49■■□□□ 1.35
TMC1Q8TDI8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMC1Q8TDI8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TMC1Q8TDI8 PRORSD1P-202ENST00000563365 2154 ntBASIC23.47■■□□□ 1.35
TMC1Q8TDI8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TMC1Q8TDI8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TMC1Q8TDI8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
TMC1Q8TDI8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms