Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.04□□□□□ -0.64
SMIM11BQ8TCY0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 MYCLP1-201ENST00000372451 1075 ntBASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 CRYGFP-201ENST00000418459 633 ntBASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 AC026271.2-201ENST00000428091 497 ntBASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 AC112698.1-201ENST00000510299 916 ntBASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 FRMD8P1-201ENST00000440433 1524 ntBASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SMIM11BQ8TCY0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM11BQ8TCY0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM11BQ8TCY0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
SMIM11BQ8TCY0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM11BQ8TCY0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.02□□□□□ -0.64
SMIM11BQ8TCY0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
SMIM11BQ8TCY0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM11BQ8TCY0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM11BQ8TCY0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM11BQ8TCY0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM11BQ8TCY0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM11BQ8TCY0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM11BQ8TCY0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms