Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 AC004832.2-201ENST00000426397 482 ntBASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 AC139530.3-201ENST00000620344 690 ntBASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 AC004877.2-201ENST00000623941 599 ntBASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 OR6D1P-203ENST00000641209 4860 ntBASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
GRIN3AQ8TCU5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 GPX1P2-201ENST00000429271 606 ntBASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 DNAJB3-201ENST00000446806 729 ntBASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 CXCL1P1-201ENST00000502804 216 ntBASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 AC096734.2-201ENST00000562054 433 ntBASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.24■□□□□ 0.35
GRIN3AQ8TCU5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.23■□□□□ 0.35
GRIN3AQ8TCU5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms