Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AD000864.1-201ENST00000624076 2295 ntBASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 MPDU1-223ENST00000582151 728 ntBASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 AC129492.6-201ENST00000611383 1305 ntBASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-3Q8TAU0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 AL603756.1-201ENST00000606511 2163 ntBASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 AC074386.1-202ENST00000463561 864 ntBASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.91■□□□□ 0.78
NKX2-3Q8TAU0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 AC067863.1-201ENST00000494933 530 ntBASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 AC012645.4-201ENST00000610691 1061 ntBASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 NKILA-202ENST00000614771 2598 ntBASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-3Q8TAU0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
NKX2-3Q8TAU0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-3Q8TAU0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-3Q8TAU0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-3Q8TAU0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms