Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 AC104394.1-201ENST00000611658 1748 ntBASIC10.45□□□□□ -0.74
SVIPQ8NHG7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 HEIH-201ENST00000623091 1652 ntBASIC10.45□□□□□ -0.74
SVIPQ8NHG7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 OR10N1P-202ENST00000641519 1479 ntBASIC10.45□□□□□ -0.74
SVIPQ8NHG7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 VPS18-201ENST00000220509 3895 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 FAM131A-201ENST00000310585 3677 ntTSL 2 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 ANKRD20A7P-201ENST00000402318 2414 ntBASIC10.45□□□□□ -0.74
SVIPQ8NHG7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 ZNF429-201ENST00000358491 2233 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 NUP85-211ENST00000579324 2010 ntTSL 2 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 AC073862.5-201ENST00000624129 2027 ntBASIC10.45□□□□□ -0.74
SVIPQ8NHG7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 AC010864.1-201ENST00000609407 1511 ntBASIC10.44□□□□□ -0.74
SVIPQ8NHG7 NMT2-201ENST00000378150 2457 ntTSL 2 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 ZNF682-202ENST00000397162 3164 ntTSL 4 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 AL355312.1-201ENST00000407115 2176 ntBASIC10.44□□□□□ -0.74
SVIPQ8NHG7 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 TARS2-204ENST00000369064 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 EXD2-206ENST00000409949 2688 ntTSL 2 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 GNL3L-201ENST00000336470 2357 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 SHANK2-AS1-201ENST00000429561 2252 ntTSL 2 BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SVIPQ8NHG7 MED24-201ENST00000356271 3446 ntTSL 2 BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 RANBP20P-201ENST00000557256 2104 ntBASIC10.43□□□□□ -0.74
SVIPQ8NHG7 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
SVIPQ8NHG7 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms