Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 FAM197Y8-203ENST00000450145 560 ntBASIC15.84■□□□□ 0.13
NUP43Q8NFH3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 TP73-AS1-207ENST00000624167 988 ntBASIC15.84■□□□□ 0.13
NUP43Q8NFH3 AL805961.1-202ENST00000641562 540 ntBASIC15.84■□□□□ 0.13
NUP43Q8NFH3 AF228730.7-201ENST00000641842 219 ntBASIC15.84■□□□□ 0.13
NUP43Q8NFH3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 AL603756.1-201ENST00000606511 2163 ntBASIC15.84■□□□□ 0.13
NUP43Q8NFH3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.84■□□□□ 0.13
NUP43Q8NFH3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NUP43Q8NFH3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.83■□□□□ 0.13
NUP43Q8NFH3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.83■□□□□ 0.13
NUP43Q8NFH3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NUP43Q8NFH3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.83■□□□□ 0.13
NUP43Q8NFH3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.83■□□□□ 0.13
NUP43Q8NFH3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NUP43Q8NFH3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.83■□□□□ 0.13
NUP43Q8NFH3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 AC087163.2-201ENST00000457299 853 ntBASIC15.83■□□□□ 0.12
NUP43Q8NFH3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NUP43Q8NFH3 LINC00895-201ENST00000629028 1637 ntBASIC15.83■□□□□ 0.12
NUP43Q8NFH3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 KRT18P27-201ENST00000427733 1299 ntBASIC15.82■□□□□ 0.12
NUP43Q8NFH3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.82■□□□□ 0.12
NUP43Q8NFH3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms