Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 IGHV3-65-201ENST00000523210 341 ntBASIC14.83□□□□□ -0.04
CPEB3Q8NE35 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 AC008667.4-201ENST00000607370 168 ntBASIC14.83□□□□□ -0.04
CPEB3Q8NE35 AC005593.1-201ENST00000624894 515 ntBASIC14.83□□□□□ -0.04
CPEB3Q8NE35 PGM5P2-202ENST00000637225 1043 ntBASIC14.83□□□□□ -0.04
CPEB3Q8NE35 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 PCDHB17P-201ENST00000539533 2393 ntBASIC14.83□□□□□ -0.04
CPEB3Q8NE35 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 AC009053.2-201ENST00000563701 2365 ntBASIC14.82□□□□□ -0.04
CPEB3Q8NE35 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 AC098831.1-202ENST00000438821 336 ntBASIC14.82□□□□□ -0.04
CPEB3Q8NE35 AC087163.2-201ENST00000457299 853 ntBASIC14.82□□□□□ -0.04
CPEB3Q8NE35 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.82□□□□□ -0.04
CPEB3Q8NE35 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 AC079776.4-201ENST00000511039 504 ntBASIC14.81□□□□□ -0.04
CPEB3Q8NE35 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 GGTLC5P-201ENST00000617623 998 ntBASIC14.81□□□□□ -0.04
CPEB3Q8NE35 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.81□□□□□ -0.04
CPEB3Q8NE35 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms