Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
C11orf42Q8N5U0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
C11orf42Q8N5U0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
C11orf42Q8N5U0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 GPR89P-201ENST00000407924 1495 ntBASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 RPS2P28-201ENST00000314255 741 ntBASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 AC105339.3-201ENST00000560043 636 ntBASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 AC006557.2-201ENST00000592985 1240 ntBASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 AC116407.3-201ENST00000623905 1129 ntBASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C11orf42Q8N5U0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 AP002414.3-201ENST00000589352 1468 ntBASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C11orf42Q8N5U0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms