Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 SPDYE14P-201ENST00000442619 822 ntBASIC26.19■■□□□ 1.78
VPS8Q8N3P4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 AL138918.1-201ENST00000568306 659 ntBASIC26.19■■□□□ 1.78
VPS8Q8N3P4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS8Q8N3P4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 KRT18P28-201ENST00000453838 1332 ntBASIC26.18■■□□□ 1.78
VPS8Q8N3P4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 GGT3P-204ENST00000453783 1664 ntBASIC26.18■■□□□ 1.78
VPS8Q8N3P4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 CD81-202ENST00000381036 880 ntTSL 3 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 KRT18P34-201ENST00000488218 1270 ntBASIC26.18■■□□□ 1.78
VPS8Q8N3P4 HLA-J-203ENST00000494367 1087 ntBASIC26.18■■□□□ 1.78
VPS8Q8N3P4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 AC027307.2-201ENST00000591252 911 ntBASIC26.18■■□□□ 1.78
VPS8Q8N3P4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 AC093028.1-201ENST00000622998 982 ntBASIC26.18■■□□□ 1.78
VPS8Q8N3P4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC26.18■■□□□ 1.78
VPS8Q8N3P4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
VPS8Q8N3P4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
VPS8Q8N3P4 MIR346-201ENST00000362234 95 ntBASIC26.17■■□□□ 1.78
VPS8Q8N3P4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
VPS8Q8N3P4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC26.17■■□□□ 1.78
VPS8Q8N3P4 PRYP6-201ENST00000514804 343 ntBASIC26.17■■□□□ 1.78
VPS8Q8N3P4 AC105233.2-201ENST00000523697 349 ntBASIC26.17■■□□□ 1.78
VPS8Q8N3P4 AF228730.5-201ENST00000530288 346 ntBASIC26.17■■□□□ 1.78
VPS8Q8N3P4 AC073439.1-201ENST00000624121 1774 ntBASIC26.17■■□□□ 1.78
VPS8Q8N3P4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VPS8Q8N3P4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
VPS8Q8N3P4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
VPS8Q8N3P4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC26.17■■□□□ 1.78
VPS8Q8N3P4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC26.17■■□□□ 1.78
VPS8Q8N3P4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC26.16■■□□□ 1.78
VPS8Q8N3P4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
VPS8Q8N3P4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms