Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 AC083849.1-201ENST00000615227 514 ntBASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 TCAF2P1-201ENST00000291129 2421 ntBASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC01561Q8N1V8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
LINC01561Q8N1V8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
LINC01561Q8N1V8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
LINC01561Q8N1V8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.4□□□□□ -0.59
LINC01561Q8N1V8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01561Q8N1V8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.4□□□□□ -0.59
LINC01561Q8N1V8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 PMPCAP1-201ENST00000508114 1576 ntBASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 AC011498.5-201ENST00000592027 486 ntBASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
LINC01561Q8N1V8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 AL596275.1-201ENST00000423464 877 ntBASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 AL671277.2-201ENST00000458060 996 ntBASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.38□□□□□ -0.59
LINC01561Q8N1V8 AC063952.2-201ENST00000498792 1227 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms