Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.44■□□□□ 0.38
NPAS3Q8IXF0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 AC067852.2-201ENST00000590513 2313 ntBASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 AC063926.2-201ENST00000623766 1308 ntBASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS3Q8IXF0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 AC093525.9-201ENST00000624961 1746 ntBASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NPAS3Q8IXF0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS3Q8IXF0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms