Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC010460.3-201ENST00000511359 1579 ntBASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CRLF3Q8IUI8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 AC109462.3-201ENST00000573934 613 ntBASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 AL390719.2-201ENST00000606993 987 ntBASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 AC012313.10-201ENST00000623509 926 ntBASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 TSPY26P-202ENST00000565928 3884 ntBASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CRLF3Q8IUI8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CRLF3Q8IUI8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CRLF3Q8IUI8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CRLF3Q8IUI8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CRLF3Q8IUI8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CRLF3Q8IUI8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CRLF3Q8IUI8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 AC063926.3-201ENST00000624734 5658 ntBASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 KRT18P1-202ENST00000452408 1331 ntBASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CRLF3Q8IUI8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.94■□□□□ 0.3
CRLF3Q8IUI8 AC092364.2-201ENST00000596710 2692 ntBASIC16.94■□□□□ 0.3
CRLF3Q8IUI8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms