Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 AC092053.1-201ENST00000605787 1936 ntBASIC18.81■□□□□ 0.6
TRIM50Q86XT4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 RNU1-129P-201ENST00000384064 167 ntBASIC18.81■□□□□ 0.6
TRIM50Q86XT4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 SPCS2P4-201ENST00000436160 681 ntBASIC18.81■□□□□ 0.6
TRIM50Q86XT4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 AC091167.2-201ENST00000579581 588 ntBASIC18.81■□□□□ 0.6
TRIM50Q86XT4 U1.21-201ENST00000580816 167 ntBASIC18.81■□□□□ 0.6
TRIM50Q86XT4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM50Q86XT4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 HCG4-201ENST00000418983 998 ntBASIC18.8■□□□□ 0.6
TRIM50Q86XT4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 AL031055.1-201ENST00000606362 631 ntBASIC18.8■□□□□ 0.6
TRIM50Q86XT4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.8■□□□□ 0.6
TRIM50Q86XT4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 LINC00896-202ENST00000609602 2128 ntBASIC18.8■□□□□ 0.6
TRIM50Q86XT4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRIM50Q86XT4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 KRT18P32-201ENST00000424695 1287 ntBASIC18.79■□□□□ 0.6
TRIM50Q86XT4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.79■□□□□ 0.6
TRIM50Q86XT4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 AC109635.5-201ENST00000533593 962 ntBASIC18.79■□□□□ 0.6
TRIM50Q86XT4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 MPDU1-223ENST00000582151 728 ntBASIC18.79■□□□□ 0.6
TRIM50Q86XT4 LINC02084-201ENST00000606069 1096 ntBASIC18.79■□□□□ 0.6
TRIM50Q86XT4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 AC131009.4-201ENST00000624048 1740 ntBASIC18.79■□□□□ 0.6
TRIM50Q86XT4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM50Q86XT4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms