Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LDB1Q86U70 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.9■□□□□ 0.3
LDB1Q86U70 AC073621.1-201ENST00000392730 636 ntBASIC16.9■□□□□ 0.3
LDB1Q86U70 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.9■□□□□ 0.3
LDB1Q86U70 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.9■□□□□ 0.3
LDB1Q86U70 PAWRP1-201ENST00000451083 565 ntBASIC16.9■□□□□ 0.3
LDB1Q86U70 AC018712.1-201ENST00000455767 687 ntBASIC16.9■□□□□ 0.3
LDB1Q86U70 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.9■□□□□ 0.3
LDB1Q86U70 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.9■□□□□ 0.3
LDB1Q86U70 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.9■□□□□ 0.3
LDB1Q86U70 KRT126P-201ENST00000549467 1181 ntBASIC16.9■□□□□ 0.3
LDB1Q86U70 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.9■□□□□ 0.3
LDB1Q86U70 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.9■□□□□ 0.3
LDB1Q86U70 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.9■□□□□ 0.3
LDB1Q86U70 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.9■□□□□ 0.3
LDB1Q86U70 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.9■□□□□ 0.3
LDB1Q86U70 AP002414.3-201ENST00000589352 1468 ntBASIC16.9■□□□□ 0.3
LDB1Q86U70 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LDB1Q86U70 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDB1Q86U70 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LDB1Q86U70 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LDB1Q86U70 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.89■□□□□ 0.3
LDB1Q86U70 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LDB1Q86U70 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LDB1Q86U70 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LDB1Q86U70 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
LDB1Q86U70 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LDB1Q86U70 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LDB1Q86U70 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LDB1Q86U70 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
LDB1Q86U70 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LDB1Q86U70 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
LDB1Q86U70 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LDB1Q86U70 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDB1Q86U70 AC004870.1-201ENST00000315132 882 ntBASIC16.89■□□□□ 0.29
LDB1Q86U70 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDB1Q86U70 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDB1Q86U70 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.89■□□□□ 0.29
LDB1Q86U70 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.89■□□□□ 0.29
LDB1Q86U70 KRT18P27-201ENST00000427733 1299 ntBASIC16.89■□□□□ 0.29
LDB1Q86U70 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDB1Q86U70 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.89■□□□□ 0.29
LDB1Q86U70 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDB1Q86U70 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 AC006557.2-201ENST00000592985 1240 ntBASIC16.89■□□□□ 0.29
LDB1Q86U70 AL049840.3-201ENST00000602669 611 ntBASIC16.89■□□□□ 0.29
LDB1Q86U70 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
LDB1Q86U70 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.89■□□□□ 0.29
LDB1Q86U70 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDB1Q86U70 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LDB1Q86U70 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDB1Q86U70 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDB1Q86U70 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDB1Q86U70 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LDB1Q86U70 AL021920.2-201ENST00000624828 1351 ntBASIC16.89■□□□□ 0.29
LDB1Q86U70 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LDB1Q86U70 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDB1Q86U70 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.88■□□□□ 0.29
LDB1Q86U70 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LDB1Q86U70 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.88■□□□□ 0.29
LDB1Q86U70 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.88■□□□□ 0.29
LDB1Q86U70 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 AC087163.2-201ENST00000457299 853 ntBASIC16.88■□□□□ 0.29
LDB1Q86U70 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDB1Q86U70 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.88■□□□□ 0.29
LDB1Q86U70 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.88■□□□□ 0.29
LDB1Q86U70 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.88■□□□□ 0.29
LDB1Q86U70 AC104692.2-201ENST00000603054 253 ntBASIC16.88■□□□□ 0.29
LDB1Q86U70 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms