Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 AC116407.3-201ENST00000623905 1129 ntBASIC11.28□□□□□ -0.6
SCXQ7RTU7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 LINC00554-201ENST00000564841 3011 ntBASIC11.28□□□□□ -0.6
SCXQ7RTU7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 TBC1D3P5-201ENST00000579401 1545 ntBASIC11.28□□□□□ -0.6
SCXQ7RTU7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC11.28□□□□□ -0.6
SCXQ7RTU7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 ZNF259P1-201ENST00000407656 1365 ntBASIC11.28□□□□□ -0.6
SCXQ7RTU7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SCXQ7RTU7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SCXQ7RTU7 HLA-J-201ENST00000462773 1622 ntBASIC11.27□□□□□ -0.6
SCXQ7RTU7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SCXQ7RTU7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SCXQ7RTU7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SCXQ7RTU7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
SCXQ7RTU7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
SCXQ7RTU7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SCXQ7RTU7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 MIR940-201ENST00000401276 94 ntBASIC11.27□□□□□ -0.61
SCXQ7RTU7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 OR7E14P-202ENST00000530490 1290 ntBASIC11.27□□□□□ -0.61
SCXQ7RTU7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SCXQ7RTU7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SCXQ7RTU7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 AC067930.6-201ENST00000623257 4947 ntBASIC11.26□□□□□ -0.61
SCXQ7RTU7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC11.26□□□□□ -0.61
SCXQ7RTU7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCXQ7RTU7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms