Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TMPOP1-202ENST00000424642 1267 ntBASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 LINC01238-205ENST00000567549 1107 ntBASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 AC011498.5-201ENST00000592027 486 ntBASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 AL138831.2-201ENST00000606564 490 ntBASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTCHD4Q6ZW05 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 PAUPAR-201ENST00000630360 2965 ntBASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 HLA-A-202ENST00000376806 1854 ntBASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 AL136038.3-201ENST00000561909 1096 ntBASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.61■□□□□ 0.09
PTCHD4Q6ZW05 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms