Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 KRT18P32-201ENST00000424695 1287 ntBASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 BCRP1-201ENST00000444246 691 ntBASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 KRT8P23-201ENST00000560090 1207 ntBASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 AC011467.4-201ENST00000594891 528 ntBASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 AC092364.2-202ENST00000597012 1073 ntBASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 AL390955.2-201ENST00000603032 514 ntBASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 AL031055.1-201ENST00000606362 631 ntBASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 AL096865.1-201ENST00000606796 927 ntBASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC62Q6P9F0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 WASH6P-202ENST00000359512 1437 ntBASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 FAM86GP-201ENST00000448322 971 ntBASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 AC087641.1-201ENST00000557561 1021 ntBASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC62Q6P9F0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 AC131009.4-201ENST00000624048 1740 ntBASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 KRT8P49-201ENST00000604166 1432 ntBASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 PMS2P4-201ENST00000412466 1052 ntBASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 AC069262.1-201ENST00000539058 672 ntBASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 AC051619.7-201ENST00000568314 623 ntBASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 MIR4492-201ENST00000581627 80 ntBASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC62Q6P9F0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms