Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.86■□□□□ 0.45
VARS2Q5ST30 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARS2Q5ST30 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VARS2Q5ST30 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VARS2Q5ST30 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VARS2Q5ST30 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VARS2Q5ST30 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VARS2Q5ST30 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.85■□□□□ 0.45
VARS2Q5ST30 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 AC108860.2-201ENST00000562760 2183 ntBASIC17.85■□□□□ 0.45
VARS2Q5ST30 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VARS2Q5ST30 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
VARS2Q5ST30 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VARS2Q5ST30 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 MIR3908-201ENST00000579798 126 ntBASIC17.84■□□□□ 0.45
VARS2Q5ST30 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VARS2Q5ST30 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.84■□□□□ 0.45
VARS2Q5ST30 AC016027.1-202ENST00000607927 1699 ntBASIC17.83■□□□□ 0.45
VARS2Q5ST30 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.83■□□□□ 0.45
VARS2Q5ST30 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.83■□□□□ 0.45
VARS2Q5ST30 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
VARS2Q5ST30 UXT-AS1-201ENST00000590504 1525 ntBASIC17.83■□□□□ 0.45
VARS2Q5ST30 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VARS2Q5ST30 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VARS2Q5ST30 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VARS2Q5ST30 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VARS2Q5ST30 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VARS2Q5ST30 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.83■□□□□ 0.45
VARS2Q5ST30 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VARS2Q5ST30 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VARS2Q5ST30 GPS2P2-201ENST00000430745 888 ntBASIC17.83■□□□□ 0.44
VARS2Q5ST30 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.83■□□□□ 0.44
VARS2Q5ST30 FAM86GP-201ENST00000448322 971 ntBASIC17.83■□□□□ 0.44
VARS2Q5ST30 HLA-J-202ENST00000469281 1241 ntBASIC17.83■□□□□ 0.44
VARS2Q5ST30 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC17.83■□□□□ 0.44
VARS2Q5ST30 KRT8P23-201ENST00000560090 1207 ntBASIC17.83■□□□□ 0.44
VARS2Q5ST30 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
VARS2Q5ST30 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.83■□□□□ 0.44
VARS2Q5ST30 Z92544.3-201ENST00000624747 417 ntBASIC17.83■□□□□ 0.44
VARS2Q5ST30 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.83■□□□□ 0.44
VARS2Q5ST30 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.83■□□□□ 0.44
VARS2Q5ST30 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARS2Q5ST30 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VARS2Q5ST30 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
VARS2Q5ST30 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VARS2Q5ST30 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VARS2Q5ST30 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms