Protein–RNA interactions for Protein: Q5J8X5

MS4A13, Membrane-spanning 4-domains subfamily A member 13, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A13Q5J8X5 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.35■□□□□ 0.37
MS4A13Q5J8X5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
MS4A13Q5J8X5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MS4A13Q5J8X5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A13Q5J8X5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A13Q5J8X5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A13Q5J8X5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A13Q5J8X5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
MS4A13Q5J8X5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A13Q5J8X5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.35■□□□□ 0.37
MS4A13Q5J8X5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 ELL2P1-201ENST00000413990 1906 ntBASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 AP002490.2-201ENST00000524791 560 ntBASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 AL691403.2-201ENST00000618460 490 ntBASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 AC092902.6-201ENST00000641783 218 ntBASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
MS4A13Q5J8X5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
MS4A13Q5J8X5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A13Q5J8X5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
MS4A13Q5J8X5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A13Q5J8X5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A13Q5J8X5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A13Q5J8X5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A13Q5J8X5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A13Q5J8X5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.33■□□□□ 0.37
MS4A13Q5J8X5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.33■□□□□ 0.37
MS4A13Q5J8X5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A13Q5J8X5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 RNU1-129P-201ENST00000384064 167 ntBASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 AC211486.1-202ENST00000416371 468 ntBASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 ACTG1P14-201ENST00000446382 1122 ntBASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 AC004967.1-201ENST00000453589 447 ntBASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 AC211476.1-201ENST00000503899 468 ntBASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 AC112191.1-201ENST00000523689 701 ntBASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 U1.21-201ENST00000580816 167 ntBASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 AC134684.3-201ENST00000641758 218 ntBASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A13Q5J8X5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A13Q5J8X5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms