Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ACTL9-202ENST00000612068 1252 ntBASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 Z83851.2-201ENST00000609564 659 ntBASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 AC131009.4-201ENST00000624048 1740 ntBASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN20Q4JDL3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 IL9RP2-201ENST00000423948 1312 ntBASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 AL353732.1-201ENST00000569618 1459 ntBASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 VN2R19P-201ENST00000442399 1052 ntBASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 AC034105.1-201ENST00000563488 319 ntBASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 AC145285.3-201ENST00000564603 959 ntBASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 AC104109.2-201ENST00000602919 1418 ntBASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN20Q4JDL3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN20Q4JDL3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.77■□□□□ 0.43
PTPN20Q4JDL3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.77■□□□□ 0.43
PTPN20Q4JDL3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.77■□□□□ 0.43
PTPN20Q4JDL3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN20Q4JDL3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN20Q4JDL3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN20Q4JDL3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN20Q4JDL3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN20Q4JDL3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 AL671710.1-201ENST00000610245 2349 ntBASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 FAM185BP-201ENST00000443595 716 ntBASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 HCG4B-203ENST00000450128 991 ntBASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 SLC25A1P1-201ENST00000528351 927 ntBASIC17.76■□□□□ 0.43
PTPN20Q4JDL3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms