Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 RNF216P1-203ENST00000404404 2427 ntBASIC20.34■□□□□ 0.85
RFX7Q2KHR2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 AC112191.1-201ENST00000523689 701 ntBASIC20.34■□□□□ 0.85
RFX7Q2KHR2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 AL603756.1-201ENST00000606511 2163 ntBASIC20.34■□□□□ 0.85
RFX7Q2KHR2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.34■□□□□ 0.85
RFX7Q2KHR2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFX7Q2KHR2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.33■□□□□ 0.85
RFX7Q2KHR2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFX7Q2KHR2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFX7Q2KHR2 AC009053.2-201ENST00000563701 2365 ntBASIC20.33■□□□□ 0.85
RFX7Q2KHR2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 AL645939.2-201ENST00000427340 991 ntBASIC20.33■□□□□ 0.84
RFX7Q2KHR2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 MIR3909-201ENST00000579518 119 ntBASIC20.33■□□□□ 0.84
RFX7Q2KHR2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.33■□□□□ 0.84
RFX7Q2KHR2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 AC023141.5-201ENST00000458585 616 ntBASIC20.32■□□□□ 0.84
RFX7Q2KHR2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 AC004835.2-201ENST00000603762 682 ntBASIC20.32■□□□□ 0.84
RFX7Q2KHR2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 AL645728.2-201ENST00000641974 660 ntBASIC20.32■□□□□ 0.84
RFX7Q2KHR2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.32■□□□□ 0.84
RFX7Q2KHR2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 NKILA-202ENST00000614771 2598 ntBASIC20.31■□□□□ 0.84
RFX7Q2KHR2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 AC009093.7-201ENST00000623853 1223 ntBASIC20.31■□□□□ 0.84
RFX7Q2KHR2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFX7Q2KHR2 AC006538.1-201ENST00000567905 1585 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms