Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SSRP1Q08945 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSRP1Q08945 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.62■□□□□ 0.73
SSRP1Q08945 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSRP1Q08945 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSRP1Q08945 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.62■□□□□ 0.73
SSRP1Q08945 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSRP1Q08945 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.62■□□□□ 0.73
SSRP1Q08945 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSRP1Q08945 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.62■□□□□ 0.73
SSRP1Q08945 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.62■□□□□ 0.73
SSRP1Q08945 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.62■□□□□ 0.73
SSRP1Q08945 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.62■□□□□ 0.73
SSRP1Q08945 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
SSRP1Q08945 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.62■□□□□ 0.73
SSRP1Q08945 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSRP1Q08945 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSRP1Q08945 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSRP1Q08945 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSRP1Q08945 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
SSRP1Q08945 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSRP1Q08945 AC006277.1-201ENST00000624348 1610 ntBASIC19.62■□□□□ 0.73
SSRP1Q08945 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 AL603756.1-201ENST00000606511 2163 ntBASIC19.61■□□□□ 0.73
SSRP1Q08945 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SSRP1Q08945 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.61■□□□□ 0.73
SSRP1Q08945 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.61■□□□□ 0.73
SSRP1Q08945 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 AC084018.2-201ENST00000613093 2607 ntBASIC19.61■□□□□ 0.73
SSRP1Q08945 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SSRP1Q08945 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.61■□□□□ 0.73
SSRP1Q08945 AC129492.6-201ENST00000611383 1305 ntBASIC19.61■□□□□ 0.73
SSRP1Q08945 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.61■□□□□ 0.73
SSRP1Q08945 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SSRP1Q08945 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
SSRP1Q08945 AC107918.2-201ENST00000530817 355 ntBASIC19.61■□□□□ 0.73
SSRP1Q08945 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.61■□□□□ 0.73
SSRP1Q08945 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.61■□□□□ 0.73
SSRP1Q08945 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.61■□□□□ 0.73
SSRP1Q08945 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.61■□□□□ 0.73
SSRP1Q08945 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.61■□□□□ 0.73
SSRP1Q08945 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.61■□□□□ 0.73
SSRP1Q08945 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SSRP1Q08945 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SSRP1Q08945 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.61■□□□□ 0.73
SSRP1Q08945 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSRP1Q08945 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSRP1Q08945 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSRP1Q08945 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.6■□□□□ 0.73
SSRP1Q08945 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SSRP1Q08945 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.6■□□□□ 0.73
SSRP1Q08945 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SSRP1Q08945 AC108751.1-201ENST00000490852 363 ntBASIC19.6■□□□□ 0.73
SSRP1Q08945 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.6■□□□□ 0.73
SSRP1Q08945 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.6■□□□□ 0.73
SSRP1Q08945 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.6■□□□□ 0.73
SSRP1Q08945 UNC93B6-202ENST00000528242 690 ntBASIC19.6■□□□□ 0.73
SSRP1Q08945 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.6■□□□□ 0.73
SSRP1Q08945 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.6■□□□□ 0.73
SSRP1Q08945 MPDU1-223ENST00000582151 728 ntBASIC19.6■□□□□ 0.73
SSRP1Q08945 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.6■□□□□ 0.73
SSRP1Q08945 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.6■□□□□ 0.73
SSRP1Q08945 AC013467.2-201ENST00000605472 835 ntBASIC19.6■□□□□ 0.73
SSRP1Q08945 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSRP1Q08945 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SSRP1Q08945 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSRP1Q08945 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSRP1Q08945 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.6■□□□□ 0.73
SSRP1Q08945 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
SSRP1Q08945 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.6■□□□□ 0.73
SSRP1Q08945 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSRP1Q08945 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSRP1Q08945 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSRP1Q08945 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSRP1Q08945 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.59■□□□□ 0.73
SSRP1Q08945 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.59■□□□□ 0.73
SSRP1Q08945 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SSRP1Q08945 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.59■□□□□ 0.73
SSRP1Q08945 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.59■□□□□ 0.73
SSRP1Q08945 AC099398.1-201ENST00000567919 2776 ntBASIC19.59■□□□□ 0.73
SSRP1Q08945 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSRP1Q08945 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms