Protein–RNA interactions for Protein: Q05586

GRIN1, Glutamate receptor ionotropic, NMDA 1, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1Q05586 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
GRIN1Q05586 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
GRIN1Q05586 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIN1Q05586 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.1■□□□□ 0.65
GRIN1Q05586 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.1■□□□□ 0.65
GRIN1Q05586 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
GRIN1Q05586 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
GRIN1Q05586 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.1■□□□□ 0.65
GRIN1Q05586 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIN1Q05586 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIN1Q05586 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIN1Q05586 MRPL3P1-201ENST00000400109 1033 ntBASIC19.1■□□□□ 0.65
GRIN1Q05586 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIN1Q05586 PMS2P1-201ENST00000431037 1228 ntBASIC19.1■□□□□ 0.65
GRIN1Q05586 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.1■□□□□ 0.65
GRIN1Q05586 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.1■□□□□ 0.65
GRIN1Q05586 RNA5SP419-201ENST00000515908 135 ntBASIC19.1■□□□□ 0.65
GRIN1Q05586 AP002469.2-201ENST00000531724 424 ntBASIC19.1■□□□□ 0.65
GRIN1Q05586 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.1■□□□□ 0.65
GRIN1Q05586 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.1■□□□□ 0.65
GRIN1Q05586 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.1■□□□□ 0.65
GRIN1Q05586 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.1■□□□□ 0.65
GRIN1Q05586 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
GRIN1Q05586 OR7E47P-204ENST00000575924 449 ntBASIC19.1■□□□□ 0.65
GRIN1Q05586 MIR4492-201ENST00000581627 80 ntBASIC19.1■□□□□ 0.65
GRIN1Q05586 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.1■□□□□ 0.65
GRIN1Q05586 MIR7706-201ENST00000613747 67 ntBASIC19.1■□□□□ 0.65
GRIN1Q05586 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIN1Q05586 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIN1Q05586 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIN1Q05586 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.1■□□□□ 0.65
GRIN1Q05586 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GRIN1Q05586 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
GRIN1Q05586 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.09■□□□□ 0.65
GRIN1Q05586 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.09■□□□□ 0.65
GRIN1Q05586 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.09■□□□□ 0.65
GRIN1Q05586 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.09■□□□□ 0.65
GRIN1Q05586 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.09■□□□□ 0.65
GRIN1Q05586 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.09■□□□□ 0.65
GRIN1Q05586 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
GRIN1Q05586 AC136632.2-201ENST00000512891 861 ntBASIC19.09■□□□□ 0.65
GRIN1Q05586 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.09■□□□□ 0.65
GRIN1Q05586 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.09■□□□□ 0.65
GRIN1Q05586 KRT126P-201ENST00000549467 1181 ntBASIC19.09■□□□□ 0.65
GRIN1Q05586 MPDU1-223ENST00000582151 728 ntBASIC19.09■□□□□ 0.65
GRIN1Q05586 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.09■□□□□ 0.65
GRIN1Q05586 AL356488.2-201ENST00000602755 427 ntBASIC19.09■□□□□ 0.65
GRIN1Q05586 AC013467.2-201ENST00000605472 835 ntBASIC19.09■□□□□ 0.65
GRIN1Q05586 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
GRIN1Q05586 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.09■□□□□ 0.65
GRIN1Q05586 AF228730.7-201ENST00000641842 219 ntBASIC19.09■□□□□ 0.65
GRIN1Q05586 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
GRIN1Q05586 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.09■□□□□ 0.65
GRIN1Q05586 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.09■□□□□ 0.65
GRIN1Q05586 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.09■□□□□ 0.65
GRIN1Q05586 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
GRIN1Q05586 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GRIN1Q05586 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.08■□□□□ 0.65
GRIN1Q05586 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.08■□□□□ 0.65
GRIN1Q05586 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
GRIN1Q05586 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.08■□□□□ 0.65
GRIN1Q05586 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.08■□□□□ 0.65
GRIN1Q05586 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
GRIN1Q05586 AC006538.1-201ENST00000567905 1585 ntBASIC19.08■□□□□ 0.65
GRIN1Q05586 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
GRIN1Q05586 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GRIN1Q05586 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.08■□□□□ 0.64
GRIN1Q05586 AP002490.2-201ENST00000524791 560 ntBASIC19.08■□□□□ 0.64
GRIN1Q05586 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.08■□□□□ 0.64
GRIN1Q05586 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.08■□□□□ 0.64
GRIN1Q05586 AC105339.3-201ENST00000560043 636 ntBASIC19.08■□□□□ 0.64
GRIN1Q05586 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.08■□□□□ 0.64
GRIN1Q05586 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.08■□□□□ 0.64
GRIN1Q05586 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.08■□□□□ 0.64
GRIN1Q05586 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.08■□□□□ 0.64
GRIN1Q05586 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.08■□□□□ 0.64
GRIN1Q05586 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GRIN1Q05586 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
GRIN1Q05586 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GRIN1Q05586 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GRIN1Q05586 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GRIN1Q05586 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms