Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
AP3S2P59780 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
AP3S2P59780 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.59□□□□□ -0.07
AP3S2P59780 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
AP3S2P59780 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP3S2P59780 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S2P59780 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.58□□□□□ -0.07
AP3S2P59780 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S2P59780 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S2P59780 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
AP3S2P59780 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
AP3S2P59780 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
AP3S2P59780 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S2P59780 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.58□□□□□ -0.07
AP3S2P59780 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S2P59780 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S2P59780 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP3S2P59780 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.58□□□□□ -0.08
AP3S2P59780 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.58□□□□□ -0.08
AP3S2P59780 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
AP3S2P59780 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.58□□□□□ -0.08
AP3S2P59780 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.58□□□□□ -0.08
AP3S2P59780 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 AL645728.1-201ENST00000366221 2101 ntBASIC14.58□□□□□ -0.08
AP3S2P59780 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.58□□□□□ -0.08
AP3S2P59780 AC096633.1-201ENST00000422446 749 ntBASIC14.58□□□□□ -0.08
AP3S2P59780 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.58□□□□□ -0.08
AP3S2P59780 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.58□□□□□ -0.08
AP3S2P59780 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.58□□□□□ -0.08
AP3S2P59780 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP3S2P59780 AC024563.2-201ENST00000603282 481 ntBASIC14.58□□□□□ -0.08
AP3S2P59780 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.58□□□□□ -0.08
AP3S2P59780 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.58□□□□□ -0.08
AP3S2P59780 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.58□□□□□ -0.08
AP3S2P59780 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP3S2P59780 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP3S2P59780 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.58□□□□□ -0.08
AP3S2P59780 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
AP3S2P59780 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
AP3S2P59780 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.58□□□□□ -0.08
AP3S2P59780 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 AC144831.1-201ENST00000573312 2656 ntBASIC14.58□□□□□ -0.08
AP3S2P59780 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP3S2P59780 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
AP3S2P59780 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S2P59780 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S2P59780 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
AP3S2P59780 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
AP3S2P59780 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
AP3S2P59780 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S2P59780 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S2P59780 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S2P59780 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S2P59780 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
AP3S2P59780 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S2P59780 MYO15B-237ENST00000642007 4893 ntBASIC14.57□□□□□ -0.08
AP3S2P59780 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S2P59780 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S2P59780 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S2P59780 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.57□□□□□ -0.08
AP3S2P59780 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S2P59780 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S2P59780 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.57□□□□□ -0.08
AP3S2P59780 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP3S2P59780 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
AP3S2P59780 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms