Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN2P57739 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 RNU1-129P-201ENST00000384064 167 ntBASIC16.65■□□□□ 0.26
CLDN2P57739 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.65■□□□□ 0.26
CLDN2P57739 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN2P57739 KRT18P32-201ENST00000424695 1287 ntBASIC16.65■□□□□ 0.26
CLDN2P57739 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN2P57739 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CLDN2P57739 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN2P57739 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLDN2P57739 U1.21-201ENST00000580816 167 ntBASIC16.65■□□□□ 0.26
CLDN2P57739 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CLDN2P57739 LINC02084-201ENST00000606069 1096 ntBASIC16.65■□□□□ 0.26
CLDN2P57739 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CLDN2P57739 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN2P57739 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN2P57739 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN2P57739 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN2P57739 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLDN2P57739 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLDN2P57739 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN2P57739 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.64■□□□□ 0.25
CLDN2P57739 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN2P57739 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 KRT8P49-201ENST00000604166 1432 ntBASIC16.64■□□□□ 0.25
CLDN2P57739 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLDN2P57739 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.64■□□□□ 0.25
CLDN2P57739 AC109635.5-201ENST00000533593 962 ntBASIC16.64■□□□□ 0.25
CLDN2P57739 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLDN2P57739 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN2P57739 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLDN2P57739 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CLDN2P57739 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN2P57739 AC106820.2-201ENST00000563775 3264 ntBASIC16.64■□□□□ 0.25
CLDN2P57739 AL021920.2-201ENST00000624828 1351 ntBASIC16.64■□□□□ 0.25
CLDN2P57739 LTB4R2-202ENST00000528054 3092 ntBASIC16.64■□□□□ 0.25
CLDN2P57739 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN2P57739 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN2P57739 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CLDN2P57739 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDN2P57739 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN2P57739 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN2P57739 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN2P57739 LINC02012-201ENST00000608206 1725 ntBASIC16.63■□□□□ 0.25
CLDN2P57739 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN2P57739 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN2P57739 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN2P57739 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN2P57739 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN2P57739 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 IGHV3-62-201ENST00000520057 340 ntBASIC16.63■□□□□ 0.25
CLDN2P57739 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN2P57739 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN2P57739 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN2P57739 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN2P57739 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 Z92544.3-201ENST00000624747 417 ntBASIC16.63■□□□□ 0.25
CLDN2P57739 UXT-AS1-201ENST00000590504 1525 ntBASIC16.63■□□□□ 0.25
CLDN2P57739 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN2P57739 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN2P57739 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms