Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CLDN8P56748 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN8P56748 NKAPP1-205ENST00000585790 367 ntBASIC16.1■□□□□ 0.17
CLDN8P56748 AC138894.3-201ENST00000603787 634 ntBASIC16.1■□□□□ 0.17
CLDN8P56748 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.1■□□□□ 0.17
CLDN8P56748 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN8P56748 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN8P56748 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLDN8P56748 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN8P56748 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN8P56748 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN8P56748 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CLDN8P56748 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN8P56748 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN8P56748 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN8P56748 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN8P56748 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN8P56748 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN8P56748 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN8P56748 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN8P56748 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN8P56748 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN8P56748 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLDN8P56748 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN8P56748 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN8P56748 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN8P56748 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN8P56748 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN8P56748 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN8P56748 AL139288.1-201ENST00000623748 933 ntBASIC16.09■□□□□ 0.17
CLDN8P56748 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN8P56748 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 TOP3BP1-201ENST00000420768 1380 ntBASIC16.09■□□□□ 0.17
CLDN8P56748 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLDN8P56748 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN8P56748 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN8P56748 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN8P56748 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN8P56748 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.08■□□□□ 0.17
CLDN8P56748 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.08■□□□□ 0.17
CLDN8P56748 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CLDN8P56748 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CLDN8P56748 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLDN8P56748 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CLDN8P56748 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN8P56748 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN8P56748 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN8P56748 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN8P56748 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN8P56748 RBM17P3-201ENST00000417687 1192 ntBASIC16.08■□□□□ 0.16
CLDN8P56748 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN8P56748 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN8P56748 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN8P56748 AL139424.1-201ENST00000607572 797 ntBASIC16.08■□□□□ 0.16
CLDN8P56748 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.08■□□□□ 0.16
CLDN8P56748 AL589182.2-201ENST00000619332 1049 ntBASIC16.08■□□□□ 0.16
CLDN8P56748 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLDN8P56748 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN8P56748 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLDN8P56748 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN8P56748 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN8P56748 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN8P56748 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN8P56748 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN8P56748 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN8P56748 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CLDN8P56748 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN8P56748 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN8P56748 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms