Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 AC084018.2-201ENST00000613093 2607 ntBASIC18.13■□□□□ 0.49
VCPP55072 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.13■□□□□ 0.49
VCPP55072 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VCPP55072 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VCPP55072 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VCPP55072 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.12■□□□□ 0.49
VCPP55072 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 MRPL20P1-201ENST00000400819 433 ntBASIC18.12■□□□□ 0.49
VCPP55072 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 KLF4P1-201ENST00000412782 1185 ntBASIC18.12■□□□□ 0.49
VCPP55072 AC108073.2-201ENST00000464002 357 ntBASIC18.12■□□□□ 0.49
VCPP55072 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.12■□□□□ 0.49
VCPP55072 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VCPP55072 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VCPP55072 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.12■□□□□ 0.49
VCPP55072 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.12■□□□□ 0.49
VCPP55072 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.12■□□□□ 0.49
VCPP55072 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.12■□□□□ 0.49
VCPP55072 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.12■□□□□ 0.49
VCPP55072 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.12■□□□□ 0.49
VCPP55072 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.12■□□□□ 0.49
VCPP55072 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.12■□□□□ 0.49
VCPP55072 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.12■□□□□ 0.49
VCPP55072 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
VCPP55072 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.12■□□□□ 0.49
VCPP55072 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCPP55072 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
VCPP55072 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
VCPP55072 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.11■□□□□ 0.49
VCPP55072 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VCPP55072 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
VCPP55072 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.11■□□□□ 0.49
VCPP55072 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VCPP55072 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.11■□□□□ 0.49
VCPP55072 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.11■□□□□ 0.49
VCPP55072 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.11■□□□□ 0.49
VCPP55072 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VCPP55072 AC073592.4-201ENST00000623827 446 ntBASIC18.11■□□□□ 0.49
VCPP55072 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VCPP55072 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VCPP55072 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.11■□□□□ 0.49
VCPP55072 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.11■□□□□ 0.49
VCPP55072 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCPP55072 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCPP55072 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.1■□□□□ 0.49
VCPP55072 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.1■□□□□ 0.49
VCPP55072 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VCPP55072 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCPP55072 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCPP55072 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.1■□□□□ 0.49
VCPP55072 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCPP55072 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.1■□□□□ 0.49
VCPP55072 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.1■□□□□ 0.49
VCPP55072 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCPP55072 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCPP55072 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCPP55072 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VCPP55072 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCPP55072 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCPP55072 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCPP55072 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms