Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.6■□□□□ 0.57
PMS1P54277 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.6■□□□□ 0.57
PMS1P54277 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PMS1P54277 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.6■□□□□ 0.57
PMS1P54277 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PMS1P54277 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.6■□□□□ 0.57
PMS1P54277 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 TOP3BP1-201ENST00000420768 1380 ntBASIC18.6■□□□□ 0.57
PMS1P54277 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.6■□□□□ 0.57
PMS1P54277 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.6■□□□□ 0.57
PMS1P54277 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.6■□□□□ 0.57
PMS1P54277 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.6■□□□□ 0.57
PMS1P54277 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.6■□□□□ 0.57
PMS1P54277 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.6■□□□□ 0.57
PMS1P54277 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.6■□□□□ 0.57
PMS1P54277 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.6■□□□□ 0.57
PMS1P54277 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PMS1P54277 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PMS1P54277 TP73-AS1-207ENST00000624167 988 ntBASIC18.6■□□□□ 0.57
PMS1P54277 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PMS1P54277 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.6■□□□□ 0.57
PMS1P54277 AL391005.1-201ENST00000623953 2435 ntBASIC18.6■□□□□ 0.57
PMS1P54277 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.6■□□□□ 0.57
PMS1P54277 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMS1P54277 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 AC008741.2-201ENST00000612792 3115 ntBASIC18.59■□□□□ 0.57
PMS1P54277 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.59■□□□□ 0.57
PMS1P54277 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PMS1P54277 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.59■□□□□ 0.57
PMS1P54277 RPS2P1-201ENST00000434010 821 ntBASIC18.59■□□□□ 0.57
PMS1P54277 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PMS1P54277 SCARNA2-201ENST00000458748 420 ntBASIC18.59■□□□□ 0.57
PMS1P54277 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.59■□□□□ 0.57
PMS1P54277 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.59■□□□□ 0.57
PMS1P54277 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.59■□□□□ 0.57
PMS1P54277 KRT18P56-201ENST00000507275 550 ntBASIC18.59■□□□□ 0.57
PMS1P54277 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.59■□□□□ 0.57
PMS1P54277 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PMS1P54277 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.59■□□□□ 0.57
PMS1P54277 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PMS1P54277 AC107918.4-202ENST00000641623 219 ntBASIC18.59■□□□□ 0.57
PMS1P54277 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 PI4KAP1-204ENST00000612579 1703 ntBASIC18.59■□□□□ 0.57
PMS1P54277 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PMS1P54277 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PMS1P54277 AC026691.1-201ENST00000602502 2017 ntBASIC18.59■□□□□ 0.57
PMS1P54277 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.59■□□□□ 0.57
PMS1P54277 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PMS1P54277 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PMS1P54277 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PMS1P54277 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PMS1P54277 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PMS1P54277 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PMS1P54277 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PMS1P54277 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PMS1P54277 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.57
PMS1P54277 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.58■□□□□ 0.57
PMS1P54277 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PMS1P54277 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PMS1P54277 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PMS1P54277 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PMS1P54277 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PMS1P54277 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
PMS1P54277 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PMS1P54277 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PMS1P54277 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PMS1P54277 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PMS1P54277 AC073621.1-201ENST00000392730 636 ntBASIC18.58■□□□□ 0.56
PMS1P54277 KRT18P27-201ENST00000427733 1299 ntBASIC18.58■□□□□ 0.56
PMS1P54277 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms