Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC16.82■□□□□ 0.28
NUBP1P53384 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NUBP1P53384 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC16.82■□□□□ 0.28
NUBP1P53384 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NUBP1P53384 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC16.82■□□□□ 0.28
NUBP1P53384 AC010086.1-201ENST00000437359 1052 ntBASIC16.82■□□□□ 0.28
NUBP1P53384 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.82■□□□□ 0.28
NUBP1P53384 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.82■□□□□ 0.28
NUBP1P53384 SNORA48.9-201ENST00000516419 162 ntBASIC16.82■□□□□ 0.28
NUBP1P53384 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 AP000770.2-201ENST00000623694 100 ntBASIC16.82■□□□□ 0.28
NUBP1P53384 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.82■□□□□ 0.28
NUBP1P53384 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.82■□□□□ 0.28
NUBP1P53384 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NUBP1P53384 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NUBP1P53384 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.82■□□□□ 0.28
NUBP1P53384 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.82■□□□□ 0.28
NUBP1P53384 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
NUBP1P53384 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
NUBP1P53384 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.81■□□□□ 0.28
NUBP1P53384 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.81■□□□□ 0.28
NUBP1P53384 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.81■□□□□ 0.28
NUBP1P53384 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.81■□□□□ 0.28
NUBP1P53384 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NUBP1P53384 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.81■□□□□ 0.28
NUBP1P53384 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.81■□□□□ 0.28
NUBP1P53384 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC16.81■□□□□ 0.28
NUBP1P53384 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.81■□□□□ 0.28
NUBP1P53384 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.81■□□□□ 0.28
NUBP1P53384 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC16.81■□□□□ 0.28
NUBP1P53384 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.81■□□□□ 0.28
NUBP1P53384 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.81■□□□□ 0.28
NUBP1P53384 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 AC016252.1-201ENST00000609721 474 ntBASIC16.81■□□□□ 0.28
NUBP1P53384 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC16.81■□□□□ 0.28
NUBP1P53384 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.81■□□□□ 0.28
NUBP1P53384 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 AL109936.8-201ENST00000641772 604 ntBASIC16.81■□□□□ 0.28
NUBP1P53384 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
NUBP1P53384 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.81■□□□□ 0.28
NUBP1P53384 AC093484.2-201ENST00000580996 2166 ntBASIC16.81■□□□□ 0.28
NUBP1P53384 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NUBP1P53384 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NUBP1P53384 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.81■□□□□ 0.28
NUBP1P53384 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.81■□□□□ 0.28
NUBP1P53384 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.8■□□□□ 0.28
NUBP1P53384 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.8■□□□□ 0.28
NUBP1P53384 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
NUBP1P53384 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.8■□□□□ 0.28
NUBP1P53384 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.8■□□□□ 0.28
NUBP1P53384 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 AL627171.1-201ENST00000618845 1308 ntBASIC16.8■□□□□ 0.28
NUBP1P53384 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.8■□□□□ 0.28
NUBP1P53384 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.8■□□□□ 0.28
NUBP1P53384 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NUBP1P53384 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.8■□□□□ 0.28
NUBP1P53384 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC16.8■□□□□ 0.28
NUBP1P53384 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.8■□□□□ 0.28
NUBP1P53384 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.8■□□□□ 0.28
NUBP1P53384 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.8■□□□□ 0.28
NUBP1P53384 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC16.8■□□□□ 0.28
NUBP1P53384 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.8■□□□□ 0.28
NUBP1P53384 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.8■□□□□ 0.28
NUBP1P53384 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms