Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.8■□□□□ 0.6
LBX1P52954 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.8■□□□□ 0.6
LBX1P52954 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.8■□□□□ 0.6
LBX1P52954 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
LBX1P52954 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
LBX1P52954 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LBX1P52954 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.79■□□□□ 0.6
LBX1P52954 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LBX1P52954 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LBX1P52954 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.79■□□□□ 0.6
LBX1P52954 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.79■□□□□ 0.6
LBX1P52954 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.79■□□□□ 0.6
LBX1P52954 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LBX1P52954 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.79■□□□□ 0.6
LBX1P52954 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
LBX1P52954 RN7SL399P-201ENST00000471648 279 ntBASIC18.79■□□□□ 0.6
LBX1P52954 AC008267.1-201ENST00000474858 1069 ntBASIC18.79■□□□□ 0.6
LBX1P52954 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.79■□□□□ 0.6
LBX1P52954 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.79■□□□□ 0.6
LBX1P52954 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.79■□□□□ 0.6
LBX1P52954 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.79■□□□□ 0.6
LBX1P52954 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.79■□□□□ 0.6
LBX1P52954 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.79■□□□□ 0.6
LBX1P52954 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.79■□□□□ 0.6
LBX1P52954 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.79■□□□□ 0.6
LBX1P52954 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LBX1P52954 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBX1P52954 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.78■□□□□ 0.6
LBX1P52954 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LBX1P52954 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LBX1P52954 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LBX1P52954 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LBX1P52954 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.78■□□□□ 0.6
LBX1P52954 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LBX1P52954 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.78■□□□□ 0.6
LBX1P52954 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.78■□□□□ 0.6
LBX1P52954 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.78■□□□□ 0.6
LBX1P52954 SPDYE17-201ENST00000412399 783 ntBASIC18.78■□□□□ 0.6
LBX1P52954 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
LBX1P52954 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.78■□□□□ 0.6
LBX1P52954 MIR3619-201ENST00000579667 83 ntBASIC18.78■□□□□ 0.6
LBX1P52954 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LBX1P52954 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
LBX1P52954 AC020914.3-201ENST00000594712 304 ntBASIC18.78■□□□□ 0.6
LBX1P52954 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.78■□□□□ 0.6
LBX1P52954 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.78■□□□□ 0.6
LBX1P52954 AC138627.1-207ENST00000641560 1006 ntBASIC18.78■□□□□ 0.6
LBX1P52954 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.78■□□□□ 0.6
LBX1P52954 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LBX1P52954 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LBX1P52954 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.78■□□□□ 0.6
LBX1P52954 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.78■□□□□ 0.6
LBX1P52954 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LBX1P52954 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LBX1P52954 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LBX1P52954 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LBX1P52954 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LBX1P52954 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LBX1P52954 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.77■□□□□ 0.6
LBX1P52954 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LBX1P52954 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LBX1P52954 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LBX1P52954 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.77■□□□□ 0.6
LBX1P52954 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LBX1P52954 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LBX1P52954 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LBX1P52954 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.77■□□□□ 0.6
LBX1P52954 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LBX1P52954 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LBX1P52954 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LBX1P52954 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.77■□□□□ 0.6
LBX1P52954 AC016694.1-201ENST00000434179 700 ntBASIC18.77■□□□□ 0.6
LBX1P52954 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LBX1P52954 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.77■□□□□ 0.6
LBX1P52954 MPDU1-223ENST00000582151 728 ntBASIC18.77■□□□□ 0.6
LBX1P52954 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.77■□□□□ 0.6
LBX1P52954 CYP2A7P1-201ENST00000595391 815 ntBASIC18.77■□□□□ 0.6
LBX1P52954 AP003419.4-201ENST00000616071 517 ntBASIC18.77■□□□□ 0.6
LBX1P52954 RHOXF1P1-202ENST00000635473 501 ntBASIC18.77■□□□□ 0.6
LBX1P52954 AC008687.7-202ENST00000637404 953 ntBASIC18.77■□□□□ 0.6
LBX1P52954 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms