Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EFNA3P52797 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNA3P52797 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
EFNA3P52797 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNA3P52797 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EFNA3P52797 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNA3P52797 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EFNA3P52797 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EFNA3P52797 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNA3P52797 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.82■□□□□ 0.12
EFNA3P52797 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNA3P52797 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNA3P52797 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
EFNA3P52797 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.82■□□□□ 0.12
EFNA3P52797 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
EFNA3P52797 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.82■□□□□ 0.12
EFNA3P52797 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.81■□□□□ 0.12
EFNA3P52797 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.81■□□□□ 0.12
EFNA3P52797 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.81■□□□□ 0.12
EFNA3P52797 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.81■□□□□ 0.12
EFNA3P52797 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
EFNA3P52797 AP006288.1-201ENST00000446065 395 ntBASIC15.81■□□□□ 0.12
EFNA3P52797 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
EFNA3P52797 AC092183.1-201ENST00000469884 875 ntBASIC15.81■□□□□ 0.12
EFNA3P52797 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
EFNA3P52797 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.81■□□□□ 0.12
EFNA3P52797 AC005412.3-201ENST00000580309 715 ntBASIC15.81■□□□□ 0.12
EFNA3P52797 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.81■□□□□ 0.12
EFNA3P52797 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 LETM1P2-201ENST00000597330 2178 ntBASIC15.81■□□□□ 0.12
EFNA3P52797 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.81■□□□□ 0.12
EFNA3P52797 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
EFNA3P52797 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNA3P52797 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.8■□□□□ 0.12
EFNA3P52797 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
EFNA3P52797 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.8■□□□□ 0.12
EFNA3P52797 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.8■□□□□ 0.12
EFNA3P52797 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
EFNA3P52797 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.8■□□□□ 0.12
EFNA3P52797 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 KRT8P49-201ENST00000604166 1432 ntBASIC15.8■□□□□ 0.12
EFNA3P52797 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
EFNA3P52797 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.8■□□□□ 0.12
EFNA3P52797 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.8■□□□□ 0.12
EFNA3P52797 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.8■□□□□ 0.12
EFNA3P52797 AC140658.5-201ENST00000438532 169 ntBASIC15.8■□□□□ 0.12
EFNA3P52797 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
EFNA3P52797 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.8■□□□□ 0.12
EFNA3P52797 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.8■□□□□ 0.12
EFNA3P52797 MIR4492-201ENST00000581627 80 ntBASIC15.8■□□□□ 0.12
EFNA3P52797 MPDU1-223ENST00000582151 728 ntBASIC15.8■□□□□ 0.12
EFNA3P52797 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.8■□□□□ 0.12
EFNA3P52797 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.8■□□□□ 0.12
EFNA3P52797 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 PCDHB17P-201ENST00000539533 2393 ntBASIC15.8■□□□□ 0.12
EFNA3P52797 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.8■□□□□ 0.12
EFNA3P52797 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.8■□□□□ 0.12
EFNA3P52797 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
EFNA3P52797 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
EFNA3P52797 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.8■□□□□ 0.12
EFNA3P52797 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNA3P52797 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFNA3P52797 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EFNA3P52797 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.79■□□□□ 0.12
EFNA3P52797 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EFNA3P52797 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EFNA3P52797 AL353732.1-201ENST00000569618 1459 ntBASIC15.79■□□□□ 0.12
EFNA3P52797 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFNA3P52797 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.79■□□□□ 0.12
EFNA3P52797 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFNA3P52797 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFNA3P52797 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
EFNA3P52797 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
EFNA3P52797 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms