Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.92□□□□□ -0.02
CX3CR1P49238 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CX3CR1P49238 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.91□□□□□ -0.02
CX3CR1P49238 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.91□□□□□ -0.02
CX3CR1P49238 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.91□□□□□ -0.02
CX3CR1P49238 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 PCDHB17P-201ENST00000539533 2393 ntBASIC14.91□□□□□ -0.02
CX3CR1P49238 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CX3CR1P49238 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.91□□□□□ -0.02
CX3CR1P49238 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.91□□□□□ -0.02
CX3CR1P49238 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CX3CR1P49238 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.91□□□□□ -0.02
CX3CR1P49238 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.91□□□□□ -0.02
CX3CR1P49238 AP002490.2-201ENST00000524791 560 ntBASIC14.91□□□□□ -0.02
CX3CR1P49238 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.91□□□□□ -0.02
CX3CR1P49238 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.91□□□□□ -0.02
CX3CR1P49238 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.91□□□□□ -0.02
CX3CR1P49238 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.91□□□□□ -0.02
CX3CR1P49238 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.91□□□□□ -0.02
CX3CR1P49238 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.91□□□□□ -0.02
CX3CR1P49238 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CX3CR1P49238 AL732292.2-201ENST00000609649 430 ntBASIC14.91□□□□□ -0.02
CX3CR1P49238 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.91□□□□□ -0.02
CX3CR1P49238 PCDH8P1-201ENST00000428983 2773 ntBASIC14.91□□□□□ -0.02
CX3CR1P49238 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CX3CR1P49238 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
CX3CR1P49238 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.91□□□□□ -0.02
CX3CR1P49238 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.91□□□□□ -0.02
CX3CR1P49238 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CR1P49238 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.9□□□□□ -0.02
CX3CR1P49238 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.9□□□□□ -0.02
CX3CR1P49238 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.9□□□□□ -0.02
CX3CR1P49238 CICP6-201ENST00000457191 2729 ntBASIC14.9□□□□□ -0.02
CX3CR1P49238 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CX3CR1P49238 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.9□□□□□ -0.02
CX3CR1P49238 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CX3CR1P49238 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.9□□□□□ -0.02
CX3CR1P49238 HCG4P8-203ENST00000443049 980 ntBASIC14.9□□□□□ -0.02
CX3CR1P49238 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.9□□□□□ -0.02
CX3CR1P49238 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 MIR3652-201ENST00000579335 131 ntBASIC14.9□□□□□ -0.02
CX3CR1P49238 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.9□□□□□ -0.02
CX3CR1P49238 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.9□□□□□ -0.02
CX3CR1P49238 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
CX3CR1P49238 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CX3CR1P49238 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.9□□□□□ -0.02
CX3CR1P49238 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
CX3CR1P49238 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CX3CR1P49238 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CX3CR1P49238 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CR1P49238 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CR1P49238 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CR1P49238 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CR1P49238 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CX3CR1P49238 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms