Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP1P29466 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP1P29466 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.91■□□□□ 0.62
CASP1P29466 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.91■□□□□ 0.62
CASP1P29466 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.91■□□□□ 0.62
CASP1P29466 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.91■□□□□ 0.62
CASP1P29466 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.91■□□□□ 0.62
CASP1P29466 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.91■□□□□ 0.62
CASP1P29466 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.91■□□□□ 0.62
CASP1P29466 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CASP1P29466 AC148477.8-201ENST00000624298 468 ntBASIC18.91■□□□□ 0.62
CASP1P29466 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP1P29466 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.91■□□□□ 0.62
CASP1P29466 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP1P29466 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASP1P29466 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.91■□□□□ 0.62
CASP1P29466 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASP1P29466 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP1P29466 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP1P29466 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP1P29466 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP1P29466 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.91■□□□□ 0.62
CASP1P29466 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASP1P29466 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.9■□□□□ 0.62
CASP1P29466 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CASP1P29466 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CASP1P29466 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.9■□□□□ 0.62
CASP1P29466 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CASP1P29466 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.9■□□□□ 0.62
CASP1P29466 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.9■□□□□ 0.62
CASP1P29466 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.9■□□□□ 0.62
CASP1P29466 AC079781.3-201ENST00000449110 356 ntBASIC18.9■□□□□ 0.62
CASP1P29466 AC087163.2-201ENST00000457299 853 ntBASIC18.9■□□□□ 0.62
CASP1P29466 SCARNA2-201ENST00000458748 420 ntBASIC18.9■□□□□ 0.62
CASP1P29466 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.9■□□□□ 0.62
CASP1P29466 SLC25A6P2-201ENST00000497974 877 ntBASIC18.9■□□□□ 0.62
CASP1P29466 AC012640.2-201ENST00000561606 901 ntBASIC18.9■□□□□ 0.62
CASP1P29466 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CASP1P29466 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.9■□□□□ 0.62
CASP1P29466 AL691432.3-201ENST00000621860 400 ntBASIC18.9■□□□□ 0.62
CASP1P29466 AC107918.4-202ENST00000641623 219 ntBASIC18.9■□□□□ 0.62
CASP1P29466 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 PI4KAP1-204ENST00000612579 1703 ntBASIC18.9■□□□□ 0.62
CASP1P29466 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.9■□□□□ 0.62
CASP1P29466 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.9■□□□□ 0.62
CASP1P29466 AC002310.6-201ENST00000624451 1377 ntBASIC18.9■□□□□ 0.62
CASP1P29466 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.9■□□□□ 0.62
CASP1P29466 AL671710.1-201ENST00000610245 2349 ntBASIC18.9■□□□□ 0.62
CASP1P29466 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.9■□□□□ 0.62
CASP1P29466 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP1P29466 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.9■□□□□ 0.62
CASP1P29466 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.9■□□□□ 0.62
CASP1P29466 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.89■□□□□ 0.61
CASP1P29466 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP1P29466 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP1P29466 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP1P29466 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP1P29466 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.89■□□□□ 0.61
CASP1P29466 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP1P29466 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.89■□□□□ 0.61
CASP1P29466 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.89■□□□□ 0.61
CASP1P29466 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CASP1P29466 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.89■□□□□ 0.61
CASP1P29466 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CASP1P29466 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.89■□□□□ 0.61
CASP1P29466 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CASP1P29466 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP1P29466 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP1P29466 AL021920.2-201ENST00000624828 1351 ntBASIC18.89■□□□□ 0.61
CASP1P29466 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.89■□□□□ 0.61
CASP1P29466 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP1P29466 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.89■□□□□ 0.61
CASP1P29466 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP1P29466 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.89■□□□□ 0.61
CASP1P29466 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CASP1P29466 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CASP1P29466 LINC00895-201ENST00000629028 1637 ntBASIC18.89■□□□□ 0.61
CASP1P29466 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASP1P29466 SNX33P1-201ENST00000592116 1762 ntBASIC18.88■□□□□ 0.61
CASP1P29466 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
CASP1P29466 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASP1P29466 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.88■□□□□ 0.61
CASP1P29466 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms