Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.81■□□□□ 0.6
CTGFP29279 AL109936.8-201ENST00000641772 604 ntBASIC18.81■□□□□ 0.6
CTGFP29279 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTGFP29279 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTGFP29279 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTGFP29279 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTGFP29279 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.81■□□□□ 0.6
CTGFP29279 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTGFP29279 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTGFP29279 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 ABALON-201ENST00000629058 1903 ntBASIC18.8■□□□□ 0.6
CTGFP29279 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CTGFP29279 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.8■□□□□ 0.6
CTGFP29279 TPRX2P-201ENST00000535362 881 ntBASIC18.8■□□□□ 0.6
CTGFP29279 AP005482.1-201ENST00000563722 1273 ntBASIC18.8■□□□□ 0.6
CTGFP29279 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.8■□□□□ 0.6
CTGFP29279 WFDC1-204ENST00000613603 549 ntBASIC18.8■□□□□ 0.6
CTGFP29279 GPR182-203ENST00000622922 591 ntBASIC18.8■□□□□ 0.6
CTGFP29279 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.8■□□□□ 0.6
CTGFP29279 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.8■□□□□ 0.6
CTGFP29279 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CTGFP29279 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTGFP29279 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.8■□□□□ 0.6
CTGFP29279 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.79■□□□□ 0.6
CTGFP29279 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.79■□□□□ 0.6
CTGFP29279 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CTGFP29279 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTGFP29279 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
CTGFP29279 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTGFP29279 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.79■□□□□ 0.6
CTGFP29279 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
CTGFP29279 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.79■□□□□ 0.6
CTGFP29279 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.79■□□□□ 0.6
CTGFP29279 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.79■□□□□ 0.6
CTGFP29279 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.79■□□□□ 0.6
CTGFP29279 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.79■□□□□ 0.6
CTGFP29279 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.79■□□□□ 0.6
CTGFP29279 AC008735.3-201ENST00000596646 500 ntBASIC18.79■□□□□ 0.6
CTGFP29279 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTGFP29279 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.79■□□□□ 0.6
CTGFP29279 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.79■□□□□ 0.6
CTGFP29279 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.79■□□□□ 0.6
CTGFP29279 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 AL021920.2-201ENST00000624828 1351 ntBASIC18.79■□□□□ 0.6
CTGFP29279 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTGFP29279 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.79■□□□□ 0.6
CTGFP29279 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTGFP29279 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CTGFP29279 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTGFP29279 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.78■□□□□ 0.6
CTGFP29279 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.78■□□□□ 0.6
CTGFP29279 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CTGFP29279 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTGFP29279 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTGFP29279 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CTGFP29279 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.78■□□□□ 0.6
CTGFP29279 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.78■□□□□ 0.6
CTGFP29279 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTGFP29279 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.78■□□□□ 0.6
CTGFP29279 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.78■□□□□ 0.6
CTGFP29279 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CTGFP29279 FAM8A2P-201ENST00000528813 1142 ntBASIC18.78■□□□□ 0.6
CTGFP29279 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.78■□□□□ 0.6
CTGFP29279 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.78■□□□□ 0.6
CTGFP29279 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTGFP29279 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTGFP29279 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.78■□□□□ 0.6
CTGFP29279 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTGFP29279 AL033527.5-202ENST00000641632 1098 ntBASIC18.78■□□□□ 0.6
CTGFP29279 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTGFP29279 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CTGFP29279 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms