Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.33■□□□□ 0.04
GDF1P27539 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.33■□□□□ 0.04
GDF1P27539 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.33■□□□□ 0.04
GDF1P27539 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GDF1P27539 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
GDF1P27539 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GDF1P27539 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.32■□□□□ 0.04
GDF1P27539 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 AC005332.8-201ENST00000622750 2735 ntBASIC15.32■□□□□ 0.04
GDF1P27539 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GDF1P27539 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.32■□□□□ 0.04
GDF1P27539 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GDF1P27539 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.32■□□□□ 0.04
GDF1P27539 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.32■□□□□ 0.04
GDF1P27539 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.32■□□□□ 0.04
GDF1P27539 YBX1P5-201ENST00000509441 847 ntBASIC15.32■□□□□ 0.04
GDF1P27539 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.32■□□□□ 0.04
GDF1P27539 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.32■□□□□ 0.04
GDF1P27539 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.32■□□□□ 0.04
GDF1P27539 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.32■□□□□ 0.04
GDF1P27539 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.32■□□□□ 0.04
GDF1P27539 AC124947.2-201ENST00000547118 1133 ntBASIC15.32■□□□□ 0.04
GDF1P27539 AC091167.2-201ENST00000579581 588 ntBASIC15.32■□□□□ 0.04
GDF1P27539 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.32■□□□□ 0.04
GDF1P27539 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 AL596442.2-201ENST00000610240 980 ntBASIC15.32■□□□□ 0.04
GDF1P27539 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
GDF1P27539 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.32■□□□□ 0.04
GDF1P27539 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GDF1P27539 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.32■□□□□ 0.04
GDF1P27539 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GDF1P27539 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GDF1P27539 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.32■□□□□ 0.04
GDF1P27539 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDF1P27539 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GDF1P27539 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
GDF1P27539 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GDF1P27539 AC139713.2-201ENST00000641328 2723 ntBASIC15.31■□□□□ 0.04
GDF1P27539 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.31■□□□□ 0.04
GDF1P27539 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GDF1P27539 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.31■□□□□ 0.04
GDF1P27539 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.31■□□□□ 0.04
GDF1P27539 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GDF1P27539 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.31■□□□□ 0.04
GDF1P27539 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.31■□□□□ 0.04
GDF1P27539 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 AC002056.1-201ENST00000395613 760 ntBASIC15.31■□□□□ 0.04
GDF1P27539 HCG4-201ENST00000418983 998 ntBASIC15.31■□□□□ 0.04
GDF1P27539 ACTG1P14-201ENST00000446382 1122 ntBASIC15.31■□□□□ 0.04
GDF1P27539 DNAJB3-202ENST00000449667 1266 ntBASIC15.31■□□□□ 0.04
GDF1P27539 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.31■□□□□ 0.04
GDF1P27539 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.31■□□□□ 0.04
GDF1P27539 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 SNHG9-202ENST00000564014 471 ntBASIC15.31■□□□□ 0.04
GDF1P27539 AP002472.1-201ENST00000577490 586 ntBASIC15.31■□□□□ 0.04
GDF1P27539 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.31■□□□□ 0.04
GDF1P27539 AP001350.2-201ENST00000625104 1094 ntBASIC15.31■□□□□ 0.04
GDF1P27539 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.31■□□□□ 0.04
GDF1P27539 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 KRT8P49-201ENST00000604166 1432 ntBASIC15.31■□□□□ 0.04
GDF1P27539 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GDF1P27539 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.31■□□□□ 0.04
GDF1P27539 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GDF1P27539 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GDF1P27539 AC092053.1-201ENST00000605787 1936 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms